IL_4BTS_248
3D structure
- PDB id
- 4BTS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.7 Å
Loop
- Sequence
- GUAUUUC*GUAAUC
- Length
- 13 nucleotides
- Bulged bases
- 4BTS|1|CA|A|1461, 4BTS|1|CA|U|1463, 4BTS|1|CA|U|1464, 4BTS|1|CA|A|1488, 4BTS|1|CA|U|1489
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4BTS_248 not in the Motif Atlas
- Geometric match to IL_5J7L_055
- Geometric discrepancy: 0.1892
- The information below is about IL_5J7L_055
- Detailed Annotation
- 180 degree turn
- Broad Annotation
- No text annotation
- Motif group
- IL_11344.2
- Basepair signature
- cWW-cSS-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
4BTS|1|CA|G|1459
4BTS|1|CA|U|1460
4BTS|1|CA|A|1461
4BTS|1|CA|U|1462
4BTS|1|CA|U|1463
4BTS|1|CA|U|1464
4BTS|1|CA|C|1465
*
4BTS|1|CA|G|1485
4BTS|1|CA|U|1486
4BTS|1|CA|A|1487
4BTS|1|CA|A|1488
4BTS|1|CA|U|1489
4BTS|1|CA|C|1490
Current chains
- Chain CA
- 18S ribosomal RNA
Nearby chains
- Chain CC
- 40S RIBOSOMAL PROTEIN RPS3E
- Chain CJ
- 40S RIBOSOMAL PROTEIN RPS20E
- Chain CN
- 40S RIBOSOMAL PROTEIN RPS29E
- Chain CT
- 40S RIBOSOMAL PROTEIN RPS19E
Coloring options: