IL_4BTS_295

3D structure

PDB id

4BTS (explore in PDB, NAKB, or RNA 3D Hub)

Description

THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

GUUAAAA*UC

Length

9 nucleotides

Bulged bases

4BTS|1|DA|A|613

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4BTS_295 not in the Motif Atlas

Homologous match to IL_4V88_416

Geometric discrepancy: 0.1562

The information below is about IL_4V88_416

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_38186.3

Basepair signature

cWW-L-cWW-R-L-R

Number of instances in this motif group

5

Unit IDs

4BTS|1|DA|G|610
4BTS|1|DA|U|611
4BTS|1|DA|U|612
4BTS|1|DA|A|613
4BTS|1|DA|A|614
4BTS|1|DA|A|615
4BTS|1|DA|A|616
*
4BTS|1|DA|U|1076
4BTS|1|DA|C|1077

Current chains

Chain DA

18S ribosomal RNA

Nearby chains

Chain D5

40S RIBOSOMAL PROTEIN RPS26E

Chain DL

40S RIBOSOMAL PROTEIN S12

Chain DO

40S RIBOSOMAL PROTEIN RPS13E