IL_4BTS_363
3D structure
- PDB id
- 4BTS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.7 Å
Loop
- Sequence
- UGCAUGG*UCUGUGAUG
- Length
- 16 nucleotides
- Bulged bases
- 4BTS|1|BA|C|1246, 4BTS|1|BA|U|1403, 4BTS|1|BA|G|1406
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4BTS_363 not in the Motif Atlas
- Homologous match to IL_8P9A_439
- Geometric discrepancy: 0.2216
- The information below is about IL_8P9A_439
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_86012.1
- Basepair signature
- cWW-tHS-tWH-cWH-cWW-L-L-cWW
- Number of instances in this motif group
- 1
Unit IDs
4BTS|1|BA|U|1244
4BTS|1|BA|G|1245
4BTS|1|BA|C|1246
4BTS|1|BA|A|1247
4BTS|1|BA|U|1248
4BTS|1|BA|G|1249
4BTS|1|BA|G|1250
*
4BTS|1|BA|U|1401
4BTS|1|BA|C|1402
4BTS|1|BA|U|1403
4BTS|1|BA|G|1404
4BTS|1|BA|U|1405
4BTS|1|BA|G|1406
4BTS|1|BA|A|1407
4BTS|1|BA|U|1408
4BTS|1|BA|G|1409
Current chains
- Chain BA
- 18S ribosomal RNA
Nearby chains
- Chain B0
- TRANSLATION INITIATION FACTOR EIF-1A FAMILY PROTEIN
- Chain B7
- 40S RIBOSOMAL PROTEIN RPS10E
- Chain B9
- 40S RIBOSOMAL PROTEIN RPS31E
- Chain BC
- 40S RIBOSOMAL PROTEIN RPS3E
- Chain BJ
- 40S RIBOSOMAL PROTEIN RPS20E
- Chain BN
- 40S RIBOSOMAL PROTEIN RPS29E
Coloring options: