IL_4CSU_060

3D structure

PDB id

4CSU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structures of the 50S ribosome subunit bound with ObgE

Experimental method

ELECTRON MICROSCOPY

Resolution

5.5 Å

Loop

Sequence

CUAU*AAAUG

Length

9 nucleotides

Bulged bases

4CSU|1|B|U|1554

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4CSU_060 not in the Motif Atlas

Geometric match to IL_4WF9_054

Geometric discrepancy: 0.3739

The information below is about IL_4WF9_054

Detailed Annotation

Other IL

Broad Annotation

Other IL

Motif group

IL_74317.1

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

8

Unit IDs

4CSU|1|B|C|1437
4CSU|1|B|U|1438
4CSU|1|B|A|1439
4CSU|1|B|U|1440
*
4CSU|1|B|A|1551
4CSU|1|B|A|1552
4CSU|1|B|A|1553
4CSU|1|B|U|1554
4CSU|1|B|G|1555

Current chains

Chain B

23S RRNA

Nearby chains