IL_4CSU_095

3D structure

PDB id

4CSU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structures of the 50S ribosome subunit bound with ObgE

Experimental method

ELECTRON MICROSCOPY

Resolution

5.5 Å

Loop

Sequence

AAU*AGGUU

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4CSU_095 not in the Motif Atlas

Homologous match to IL_5J7L_332

Geometric discrepancy: 0.3211

The information below is about IL_5J7L_332

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61476.2

Basepair signature

cWW-tSH-L-cWW-L

Number of instances in this motif group

7

Unit IDs

4CSU|1|B|A|2297
4CSU|1|B|A|2298
4CSU|1|B|U|2299
*
4CSU|1|B|A|2317
4CSU|1|B|G|2318
4CSU|1|B|G|2319
4CSU|1|B|U|2320
4CSU|1|B|U|2321

Current chains

Chain B

23S RRNA

Nearby chains

Chain A

5S ribosomal RNA; 5S rRNA

Chain F

50S RIBOSOMAL PROTEIN L5

Chain Y

50S RIBOSOMAL PROTEIN L27