IL_4CSU_109
3D structure
- PDB id
- 4CSU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structures of the 50S ribosome subunit bound with ObgE
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.5 Å
Loop
- Sequence
- CUGAG*CGAGAUGAG
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4CSU_109 not in the Motif Atlas
- Homologous match to IL_4WF9_099
- Geometric discrepancy: 0.3023
- The information below is about IL_4WF9_099
- Detailed Annotation
- tSH-tHS-tHW
- Broad Annotation
- tSH-tHS-tHW
- Motif group
- IL_04638.4
- Basepair signature
- cWW-tSH-tHW-tHS-L-cWW-L-L
- Number of instances in this motif group
- 6
Unit IDs
4CSU|1|B|C|2636
4CSU|1|B|U|2637
4CSU|1|B|G|2638
4CSU|1|B|A|2639
4CSU|1|B|G|2640
*
4CSU|1|B|C|2774
4CSU|1|B|G|2775
4CSU|1|B|A|2776
4CSU|1|B|G|2777
4CSU|1|B|A|2778
4CSU|1|B|U|2779
4CSU|1|B|G|2780
4CSU|1|B|A|2781
4CSU|1|B|G|2782
Current chains
- Chain B
- 23S RRNA
Nearby chains
- Chain D
- 50S RIBOSOMAL PROTEIN L3
- Chain J
- 50S RIBOSOMAL PROTEIN L13
Coloring options: