IL_4CSU_110
3D structure
- PDB id
- 4CSU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structures of the 50S ribosome subunit bound with ObgE
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.5 Å
Loop
- Sequence
- CUAGUAC*GGACCG
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4CSU_110 not in the Motif Atlas
- Geometric match to IL_4V9F_019
- Geometric discrepancy: 0.197
- The information below is about IL_4V9F_019
- Detailed Annotation
- 7x6 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_16458.4
- Basepair signature
- cWW-L-R-L-R-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 5
Unit IDs
4CSU|1|B|C|2652
4CSU|1|B|U|2653
4CSU|1|B|A|2654
4CSU|1|B|G|2655
4CSU|1|B|U|2656
4CSU|1|B|A|2657
4CSU|1|B|C|2658
*
4CSU|1|B|G|2663
4CSU|1|B|G|2664
4CSU|1|B|A|2665
4CSU|1|B|C|2666
4CSU|1|B|C|2667
4CSU|1|B|G|2668
Current chains
- Chain B
- 23S RRNA
Nearby chains
- Chain 9
- GTPASE OBGE/CGTA
- Chain G
- 50S RIBOSOMAL PROTEIN L6
Coloring options: