3D structure

PDB id
4CUV (explore in PDB, NAKB, or RNA 3D Hub)
Description
Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES
Experimental method
ELECTRON MICROSCOPY
Resolution
3.7 Å

Loop

Sequence
AAUAAUG*CUAU
Length
11 nucleotides
Bulged bases
None detected
QA status
QA data not found

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_37197.4
Basepair signature
cWW-L-L-L-tHS-cWW-cWW
Number of instances in this motif group
4

Unit IDs

4CUV|1|1|A|1883
4CUV|1|1|A|1884
4CUV|1|1|U|1885
4CUV|1|1|A|1886
4CUV|1|1|A|1887
4CUV|1|1|U|1888
4CUV|1|1|G|1889
*
4CUV|1|1|C|2346
4CUV|1|1|U|2347
4CUV|1|1|A|2348
4CUV|1|1|U|2349

Current chains

Chain 1
25S RRNA

Nearby chains

No other chains within 10Å

Coloring options:

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