Motif IL_37197.4 Version IL_37197.4 of this group appears in releases 1.18 to 1.18
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | 1 | 2 | 3 | 4 | 5 | 6 | 7 | break | 8 | 9 | 10 | 11 | 1-11 | 5-10 | 6-9 | 7-8 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4W21_105 | 4W21 | 0.1250 | 0 | 5 | A | 2832 | A | 2833 | C | 2834 | A | 2835 | A | 2836 | U | 2837 | G | 2838 | * | C | 3850 | U | 3851 | A | 3852 | U | 3853 | cWW | ntHS | cWW | |
| 2 | IL_4A1B_078 | 4A1B | 0.1164 | 0 | 1 | A | 1907 | A | 1908 | C | 1909 | A | 1910 | A | 1911 | U | 1912 | G | 1913 | * | C | 2341 | U | 2342 | A | 2343 | U | 2344 | cWW | tHS | cWW | |
| 3 | IL_3U5H_082 | 3U5H | 0.0000 | 0 | 5 | A | 1883 | A | 1884 | U | 1885 | A | 1886 | A | 1887 | U | 1888 | G | 1889 | * | C | 2346 | U | 2347 | A | 2348 | U | 2349 | cWW | tHS | cWW | |
| 4 | IL_4CUV_081 | 4CUV | 0.0856 | 0 | 1 | A | 1883 | A | 1884 | U | 1885 | A | 1886 | A | 1887 | U | 1888 | G | 1889 | * | C | 2346 | U | 2347 | A | 2348 | U | 2349 | cWW | tHS | ncWw | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AACAAUG*CUAU | 2 |
| AAUAAUG*CUAU | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| ACAAU*UA | 2 |
| AUAAU*UA | 2 |
Release history
| Release | 1.18 |
|---|---|
| Date | 2014-10-07 |
| Status | Updated, 1 parent |
Parent motifs
| Parent motif | Common motif instances | Only in IL_37197.4 | Only in the parent motif |
|---|---|---|---|
| IL_37197.3 Compare | IL_4A1B_078, IL_3U5H_082, IL_4CUV_081 | IL_4W21_105 | IL_1VWW_107 |
Children motifs
This motif has no children motifs.- Annotations
-
- (4)
- Basepair signature
- cWW-L-L-L-tHS-cWW-cWW
- Heat map statistics
- Min 0.09 | Avg 0.09 | Max 0.14
Coloring options: