IL_4CUV_090

3D structure

PDB id

4CUV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CGAUGG*UGUUGACG

Length

14 nucleotides

Bulged bases

4CUV|1|1|U|2159, 4CUV|1|1|U|2175, 4CUV|1|1|C|2179

QA status

QA data not found

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_15702.2

Basepair signature

cWW-R-tSS-tWW-tWW-cWW

Number of instances in this motif group

5

Unit IDs

4CUV|1|1|C|2156
4CUV|1|1|G|2157
4CUV|1|1|A|2158
4CUV|1|1|U|2159
4CUV|1|1|G|2160
4CUV|1|1|G|2161
*
4CUV|1|1|U|2173
4CUV|1|1|G|2174
4CUV|1|1|U|2175
4CUV|1|1|U|2176
4CUV|1|1|G|2177
4CUV|1|1|A|2178
4CUV|1|1|C|2179
4CUV|1|1|G|2180

Current chains

Chain 1

25S RRNA

Nearby chains