IL_4CUV_098

3D structure

PDB id

4CUV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CCAAAUGCCUCG*CGCG

Length

16 nucleotides

Bulged bases

4CUV|1|1|A|2281, 4CUV|1|1|C|2287, 4CUV|1|1|C|2306

QA status

QA data not found

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_15123.3

Basepair signature

cWW-L-R-cHW-L-L-L-L-L-cWW

Number of instances in this motif group

6

Unit IDs

4CUV|1|1|C|2277
4CUV|1|1|C|2278
4CUV|1|1|A|2279
4CUV|1|1|A|2280
4CUV|1|1|A|2281
4CUV|1|1|U|2282
4CUV|1|1|G|2283
4CUV|1|1|C|2284
4CUV|1|1|C|2285
4CUV|1|1|U|2286
4CUV|1|1|C|2287
4CUV|1|1|G|2288
*
4CUV|1|1|C|2304
4CUV|1|1|G|2305
4CUV|1|1|C|2306
4CUV|1|1|G|2307

Current chains

Chain 1

25S RRNA

Nearby chains