IL_4CUX_032

3D structure

PDB id

4CUX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GUGCCAG*CGGUAAUUC

Length

16 nucleotides

Bulged bases

4CUX|1|2|A|579, 4CUX|1|2|U|581, 4CUX|1|2|U|582

QA status

QA data not found

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_28572.5

Basepair signature

cWW-tWH-cSW-L-R-R-L-tHS-cWW

Number of instances in this motif group

6

Unit IDs

4CUX|1|2|G|562
4CUX|1|2|U|563
4CUX|1|2|G|564
4CUX|1|2|C|565
4CUX|1|2|C|566
4CUX|1|2|A|567
4CUX|1|2|G|568
*
4CUX|1|2|C|575
4CUX|1|2|G|576
4CUX|1|2|G|577
4CUX|1|2|U|578
4CUX|1|2|A|579
4CUX|1|2|A|580
4CUX|1|2|U|581
4CUX|1|2|U|582
4CUX|1|2|C|583

Current chains

Chain 2

18S RRNA

Nearby chains

Chain Z

RNA OF CRICKET-PARALYSIS-VIRUS-IRES