IL_4CUX_105

3D structure

PDB id

4CUX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UUUCGA*UG

Length

8 nucleotides

Bulged bases

4CUX|1|2|G|322

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4CUX_105 not in the Motif Atlas

Geometric match to IL_8CRE_409

Geometric discrepancy: 0.3592

The information below is about IL_8CRE_409

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_01372.1

Basepair signature

cWW-L-cWW-L

Number of instances in this motif group

3

Unit IDs

4CUX|1|2|U|318
4CUX|1|2|U|319
4CUX|1|2|U|320
4CUX|1|2|C|321
4CUX|1|2|G|322
4CUX|1|2|A|323
*
4CUX|1|2|U|345
4CUX|1|2|G|346

Current chains

Chain 2

18S RRNA

Nearby chains