IL_4CUX_107

3D structure

PDB id

4CUX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GAAAAAAUU*AUAUUAGC

Length

17 nucleotides

Bulged bases

4CUX|1|2|U|794

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4CUX_107 not in the Motif Atlas

Geometric match to IL_8P9A_414

Geometric discrepancy: 0.2659

The information below is about IL_8P9A_414

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_59049.2

Basepair signature

cWW-cWW-L-R-L-R-L-R-L-R-L-cWW-L

Number of instances in this motif group

3

Unit IDs

4CUX|1|2|G|751
4CUX|1|2|A|752
4CUX|1|2|A|753
4CUX|1|2|A|754
4CUX|1|2|A|755
4CUX|1|2|A|756
4CUX|1|2|A|757
4CUX|1|2|U|758
4CUX|1|2|U|759
*
4CUX|1|2|A|791
4CUX|1|2|U|792
4CUX|1|2|A|793
4CUX|1|2|U|794
4CUX|1|2|U|795
4CUX|1|2|A|796
4CUX|1|2|G|797
4CUX|1|2|C|798

Current chains

Chain 2

18S RRNA

Nearby chains