IL_4DV0_073
3D structure
- PDB id
- 4DV0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 30S ribosomal subunit with a 16S rRNA mutation, U20G
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.85 Å
Loop
- Sequence
- CGG*CCCG
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4DV0_073 not in the Motif Atlas
- Geometric match to IL_8C3A_452
- Geometric discrepancy: 0.3465
- The information below is about IL_8C3A_452
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_10289.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 237
Unit IDs
4DV0|1|A|C|656
4DV0|1|A|G|657
4DV0|1|A|G|658
*
4DV0|1|A|C|747
4DV0|1|A|C|748
4DV0|1|A|C|749
4DV0|1|A|G|750
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain H
- ribosomal protein S8
- Chain O
- ribosomal protein S15
Coloring options: