IL_4FAW_014

3D structure

PDB id

4FAW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Mg2+ and a hydrolyzed oligonucleotide fragment

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

UA*UACG

Length

6 nucleotides

Bulged bases

4FAW|1|A|A|376, 4FAW|1|A|C|377

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_82822.2

Basepair signature

cWW-cWW

Number of instances in this motif group

35

Unit IDs

4FAW|1|A|U|365
4FAW|1|A|A|366
*
4FAW|1|A|U|375
4FAW|1|A|A|376
4FAW|1|A|C|377
4FAW|1|A|G|378

Current chains

Chain A

Group IIC intron

Nearby chains

Chain B

5'-R(*A*UP*UP*UP*AP*UP*UP*A)-3'