IL_4FB0_013

3D structure

PDB id

4FB0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Oceanobacillus iheyensis group II intron C377G mutant in a ligand-free state in the presence of K+ and Mg2+

Experimental method

X-RAY DIFFRACTION

Resolution

3.22 Å

Loop

Sequence

UA*UAGG

Length

6 nucleotides

Bulged bases

4FB0|1|A|A|376, 4FB0|1|A|G|377

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4FB0_013 not in the Motif Atlas

Geometric match to IL_3IGI_013

Geometric discrepancy: 0.0985

The information below is about IL_3IGI_013

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_44609.2

Basepair signature

cWW-cWW

Number of instances in this motif group

24

Unit IDs

4FB0|1|A|U|365
4FB0|1|A|A|366
*
4FB0|1|A|U|375
4FB0|1|A|A|376
4FB0|1|A|G|377
4FB0|1|A|G|378

Current chains

Chain A

Group IIC intron

Nearby chains