IL_4IO9_009
3D structure
- PDB id
- 4IO9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of compound 4d bound to large ribosomal subunit (50S) from Deinococcus radiodurans
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- CAAG*CGAACG
- Length
- 10 nucleotides
- Bulged bases
- 4IO9|1|X|A|357, 4IO9|1|X|C|358
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4IO9_009 not in the Motif Atlas
- Homologous match to IL_7A0S_008
- Geometric discrepancy: 0.5437
- The information below is about IL_7A0S_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_74852.1
- Basepair signature
- cWW-L-R-L-R-L-cWW-L
- Number of instances in this motif group
- 4
Unit IDs
4IO9|1|X|C|303
4IO9|1|X|A|304
4IO9|1|X|A|305
4IO9|1|X|G|306
*
4IO9|1|X|C|354
4IO9|1|X|G|355
4IO9|1|X|A|356
4IO9|1|X|A|357
4IO9|1|X|C|358
4IO9|1|X|G|359
Current chains
- Chain X
- 23S ribosomal RNA
Nearby chains
- Chain R
- 50S ribosomal protein L24
Coloring options: