IL_4IOA_006
3D structure
- PDB id
- 4IOA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of compound 4e bound to large ribosomal subunit (50S) from Deinococcus radiodurans
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- GGAACUG*CUCAGUAC
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_04346.3
- Basepair signature
- cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 14
Unit IDs
4IOA|1|X|G|165
4IOA|1|X|G|166
4IOA|1|X|A|167
4IOA|1|X|A|168
4IOA|1|X|C|169
4IOA|1|X|U|170
4IOA|1|X|G|171
*
4IOA|1|X|C|178
4IOA|1|X|U|179
4IOA|1|X|C|180
4IOA|1|X|A|181
4IOA|1|X|G|182
4IOA|1|X|U|183
4IOA|1|X|A|184
4IOA|1|X|C|185
Current chains
- Chain X
- 23S ribosomal RNA
Nearby chains
- Chain I
- 50S ribosomal protein L15
- Chain U
- 50S ribosomal protein L28
Coloring options: