IL_4IOA_040
3D structure
- PDB id
- 4IOA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of compound 4e bound to large ribosomal subunit (50S) from Deinococcus radiodurans
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- GGAGGUUG*CACCCUUCAAAGAGUGCGUAAUAGCUCAC
- Length
- 37 nucleotides
- Bulged bases
- 4IOA|1|X|U|1072
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_52610.1
- Basepair signature
- cWW-tSS-tSH-L-L-L-L-cWW-L-L-L-L-L-L-L-L-cSS-L-L-L-cSW-cWW-L-cWW-R-tSH-R-R-R-R
- Number of instances in this motif group
- 1
Unit IDs
4IOA|1|X|G|1066
4IOA|1|X|G|1067
4IOA|1|X|A|1068
4IOA|1|X|G|1069
4IOA|1|X|G|1070
4IOA|1|X|U|1071
4IOA|1|X|U|1072
4IOA|1|X|G|1073
*
4IOA|1|X|C|1087
4IOA|1|X|A|1088
4IOA|1|X|C|1089
4IOA|1|X|C|1090
4IOA|1|X|C|1091
4IOA|1|X|U|1092
4IOA|1|X|U|1093
4IOA|1|X|C|1094
4IOA|1|X|A|1095
4IOA|1|X|A|1096
4IOA|1|X|A|1097
4IOA|1|X|G|1098
4IOA|1|X|A|1099
4IOA|1|X|G|1100
4IOA|1|X|U|1101
4IOA|1|X|G|1102
4IOA|1|X|C|1103
4IOA|1|X|G|1104
4IOA|1|X|U|1105
4IOA|1|X|A|1106
4IOA|1|X|A|1107
4IOA|1|X|U|1108
4IOA|1|X|A|1109
4IOA|1|X|G|1110
4IOA|1|X|C|1111
4IOA|1|X|U|1112
4IOA|1|X|C|1113
4IOA|1|X|A|1114
4IOA|1|X|C|1115
Current chains
- Chain X
- 23S ribosomal RNA
Nearby chains
- Chain 4
- 50S ribosomal protein L36
- Chain E
- 50S ribosomal protein L6
- Chain F
- 50S ribosomal protein L11
- Chain J
- 50S ribosomal protein L16
- Chain S
- 50S ribosomal protein L25
Coloring options: