IL_4IOA_063

3D structure

PDB id

4IOA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of compound 4e bound to large ribosomal subunit (50S) from Deinococcus radiodurans

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CGUAAC*GAAGAAG

Length

13 nucleotides

Bulged bases

4IOA|1|X|G|1716

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_66584.3

Basepair signature

cWW-tSH-tSH-tHH-tHS-cWW

Number of instances in this motif group

7

Unit IDs

4IOA|1|X|C|1703
4IOA|1|X|G|1704
4IOA|1|X|U|1705
4IOA|1|X|A|1706
4IOA|1|X|A|1707
4IOA|1|X|C|1708
*
4IOA|1|X|G|1713
4IOA|1|X|A|1714
4IOA|1|X|A|1715
4IOA|1|X|G|1716
4IOA|1|X|A|1717
4IOA|1|X|A|1718
4IOA|1|X|G|1719

Current chains

Chain X

23S ribosomal RNA

Nearby chains