IL_4JI7_056
3D structure
- PDB id
- 4JI7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.5 Å
Loop
- Sequence
- CGGAUU*AUGAAG
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4JI7_056 not in the Motif Atlas
- Geometric match to IL_4LFB_055
- Geometric discrepancy: 0.083
- The information below is about IL_4LFB_055
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_57885.2
- Basepair signature
- cWW-tSH-tSH-tHS-cWW-cWW
- Number of instances in this motif group
- 7
Unit IDs
4JI7|1|A|C|1303
4JI7|1|A|G|1304
4JI7|1|A|G|1305
4JI7|1|A|A|1306
4JI7|1|A|U|1307
4JI7|1|A|U|1308
*
4JI7|1|A|A|1329
4JI7|1|A|U|1330
4JI7|1|A|G|1331
4JI7|1|A|A|1332
4JI7|1|A|A|1333
4JI7|1|A|G|1334
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain M
- RIBOSOMAL PROTEIN S13
- Chain S
- RIBOSOMAL PROTEIN S19
- Chain U
- RIBOSOMAL PROTEIN THX
Coloring options: