IL_4JYA_024
3D structure
- PDB id
- 4JYA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structures of pseudouridinilated stop codons with ASLs
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- UGUAG*UGAGG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4JYA_024 not in the Motif Atlas
- Homologous match to IL_4LFB_023
- Geometric discrepancy: 0.0787
- The information below is about IL_4LFB_023
- Detailed Annotation
- tSH-tHW-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_05821.1
- Basepair signature
- cWW-tSH-tHW-tHS-cWW
- Number of instances in this motif group
- 17
Unit IDs
4JYA|1|A|U|564
4JYA|1|A|G|565
4JYA|1|A|U|566
4JYA|1|A|A|567
4JYA|1|A|G|568
*
4JYA|1|A|U|741
4JYA|1|A|G|742
4JYA|1|A|A|743
4JYA|1|A|G|744
4JYA|1|A|G|745
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain L
- 30S ribosomal protein S12
- Chain O
- 30S ribosomal protein S15
- Chain Q
- 30S ribosomal protein S17
Coloring options: