IL_4KZX_087
3D structure
- PDB id
- 4KZX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 40S ribosomal subunit in complex with eIF1.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 7.81 Å
Loop
- Sequence
- GUGCCUACC*GUAACC
- Length
- 15 nucleotides
- Bulged bases
- 4KZX|1|i|C|1549, 4KZX|1|i|U|1550, 4KZX|1|i|A|1575, 4KZX|1|i|C|1576
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4KZX_087 not in the Motif Atlas
- Geometric match to IL_6CZR_161
- Geometric discrepancy: 0.3817
- The information below is about IL_6CZR_161
- Detailed Annotation
- 180 degree turn
- Broad Annotation
- No text annotation
- Motif group
- IL_11344.1
- Basepair signature
- cWW-cSS-L-R-cWW
- Number of instances in this motif group
- 3
Unit IDs
4KZX|1|i|G|1545
4KZX|1|i|U|1546
4KZX|1|i|G|1547
4KZX|1|i|C|1548
4KZX|1|i|C|1549
4KZX|1|i|U|1550
4KZX|1|i|A|1551
4KZX|1|i|C|1552
4KZX|1|i|C|1553
*
4KZX|1|i|G|1572
4KZX|1|i|U|1573
4KZX|1|i|A|1574
4KZX|1|i|A|1575
4KZX|1|i|C|1576
4KZX|1|i|C|1577
Current chains
- Chain i
- 18S ribosomal RNA
Nearby chains
- Chain D
- 40S ribosomal protein S3
- Chain K
- 40S ribosomal protein S10
- Chain U
- 40S ribosomal protein S20
- Chain d
- 40S ribosomal protein S29
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