Motif IL_11344.1 Version IL_11344.1 of this group appears in releases 3.89 to 3.95
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | break | 4 | 5 | 6 | 1-3 | 1-6 | 3-4 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4LFB_052 | 4LFB | 0.4124 | 4 | 180 degree turn | A | SSU rRNA | G | 1255 | A | 1256 | G | 1258 | * | C | 1277 | A | 1279 | C | 1282 | ncSs | cWW | cWW |
| 2 | IL_6CZR_161 | 6CZR | 0.0000 | 4 | 180 degree turn | 1a | SSU rRNA | G | 1237 | A | 1238 | G | 1240 | * | C | 1259 | A | 1261 | C | 1264 | ncSs | cWW | cWW |
| 3 | IL_5J7L_055 | 5J7L | 0.6858 | 4 | 180 degree turn | AA | SSU rRNA | G | 1255 | A | 1256 | G | 1258 | * | C | 1277 | G | 1279 | C | 1282 | cSs | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAUG*CUAAUC | 2 |
| GAAG*CGGACC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AU*UAAU | 2 |
| AA*GGAC | 1 |
Release history
| Release | 3.89 | 3.90 | 3.91 | 3.92 | 3.93 | 3.94 | 3.95 |
|---|---|---|---|---|---|---|---|
| Date | 2024-10-09 | 2024-11-06 | 2024-12-04 | 2025-01-01 | 2025-01-29 | 2025-02-26 | 2025-03-26 |
| Status | New id, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- 180 degree turn (3)
- Basepair signature
- cWW-cSS-L-R-cWW
- Heat map statistics
- Min 0.41 | Avg 0.43 | Max 0.82
Coloring options: