IL_4KZY_022
3D structure
- PDB id
- 4KZY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 40S ribosomal subunit in complex with eIF1 and eIF1A.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 7.01 Å
Loop
- Sequence
- UAUCAA*UGACCACG
- Length
- 14 nucleotides
- Bulged bases
- 4KZY|1|i|U|351, 4KZY|1|i|C|389
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4KZY_022 not in the Motif Atlas
- Homologous match to IL_4V88_402
- Geometric discrepancy: 0.1391
- The information below is about IL_4V88_402
- Detailed Annotation
- Kink-turn with non-sequential stacking
- Broad Annotation
- Kink-turn
- Motif group
- IL_45067.5
- Basepair signature
- cWW-tSH-tSS-tHS-R-cWW-cWW-R
- Number of instances in this motif group
- 16
Unit IDs
4KZY|1|i|U|349
4KZY|1|i|A|350
4KZY|1|i|U|351
4KZY|1|i|C|352
4KZY|1|i|A|353
4KZY|1|i|A|354
*
4KZY|1|i|U|386
4KZY|1|i|G|387
4KZY|1|i|A|388
4KZY|1|i|C|389
4KZY|1|i|C|390
4KZY|1|i|A|391
4KZY|1|i|C|392
4KZY|1|i|G|393
Current chains
- Chain i
- 18S Ribosomal RNA
Nearby chains
- Chain I
- 40S Ribosomal Protein S8
- Chain L
- 40S Ribosomal Protein S11
- Chain X
- 40S Ribosomal Protein S23
Coloring options: