IL_4KZZ_034
3D structure
- PDB id
- 4KZZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 40S ribosomal subunit in complex with mRNA, initiator tRNA and eIF1A
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 7.03 Å
Loop
- Sequence
- GUCGCAG*CGGUAAUUC
- Length
- 16 nucleotides
- Bulged bases
- 4KZZ|1|i|A|618, 4KZZ|1|i|U|620
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4KZZ_034 not in the Motif Atlas
- Homologous match to IL_4V88_415
- Geometric discrepancy: 0.1491
- The information below is about IL_4V88_415
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_54177.1
- Basepair signature
- cWW-cSW-tWH-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 5
Unit IDs
4KZZ|1|i|G|601
4KZZ|1|i|U|602
4KZZ|1|i|C|603
4KZZ|1|i|G|604
4KZZ|1|i|C|605
4KZZ|1|i|A|606
4KZZ|1|i|G|607
*
4KZZ|1|i|C|614
4KZZ|1|i|G|615
4KZZ|1|i|G|616
4KZZ|1|i|U|617
4KZZ|1|i|A|618
4KZZ|1|i|A|619
4KZZ|1|i|U|620
4KZZ|1|i|U|621
4KZZ|1|i|C|622
Current chains
- Chain i
- 18S Ribosomal RNA
Nearby chains
- Chain D
- 40S Ribosomal Protein S3
- Chain X
- 40S Ribosomal Protein S23
- Chain e
- 40S Ribosomal Protein S30
- Chain k
- mRNA
- Chain n
- human initiation factor eIF1A
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