IL_4KZZ_119
3D structure
- PDB id
- 4KZZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 40S ribosomal subunit in complex with mRNA, initiator tRNA and eIF1A
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 7.03 Å
Loop
- Sequence
- GACAGGAUUG*CUCGAUUC
- Length
- 18 nucleotides
- Bulged bases
- 4KZZ|1|i|G|1281
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4KZZ_119 not in the Motif Atlas
- Homologous match to IL_8P9A_470
- Geometric discrepancy: 0.3609
- The information below is about IL_8P9A_470
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_28304.1
- Basepair signature
- cWW-R-L-R-L-R-L-R-L-L-L-cWW-cWW
- Number of instances in this motif group
- 1
Unit IDs
4KZZ|1|i|G|1277
4KZZ|1|i|A|1278
4KZZ|1|i|C|1279
4KZZ|1|i|A|1280
4KZZ|1|i|G|1281
4KZZ|1|i|G|1282
4KZZ|1|i|A|1283
4KZZ|1|i|U|1284
4KZZ|1|i|U|1285
4KZZ|1|i|G|1286
*
4KZZ|1|i|C|1305
4KZZ|1|i|U|1306
4KZZ|1|i|C|1307
4KZZ|1|i|G|1308
4KZZ|1|i|A|1309
4KZZ|1|i|U|1310
4KZZ|1|i|U|1311
4KZZ|1|i|C|1312
Current chains
- Chain i
- 18S Ribosomal RNA
Nearby chains
- Chain K
- 40S Ribosomal Protein S10
- Chain M
- 40S Ribosomal Protein S12
- Chain d
- 40S Ribosomal Protein S29
- Chain f
- 40S Ribosomal Protein S27A
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