IL_4L47_223

3D structure

PDB id

4L47 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.22 Å

Loop

Sequence

CGGAUU*AUGAAG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4L47_223 not in the Motif Atlas

Geometric match to IL_4LFB_055

Geometric discrepancy: 0.1128

The information below is about IL_4LFB_055

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_85536.2

Basepair signature

cWW-tSH-L-R-tHS-cWW-cWW

Number of instances in this motif group

8

Unit IDs

4L47|1|XA|C|1303
4L47|1|XA|G|1304
4L47|1|XA|G|1305
4L47|1|XA|A|1306
4L47|1|XA|U|1307
4L47|1|XA|U|1308
*
4L47|1|XA|A|1329
4L47|1|XA|U|1330
4L47|1|XA|G|1331
4L47|1|XA|A|1332
4L47|1|XA|A|1333
4L47|1|XA|G|1334

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XM

30S ribosomal protein S13

Chain XU

30S ribosomal protein S21