IL_4L71_049

3D structure

PDB id

4L71 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.9 Å

Loop

Sequence

CGGAUU*AUGAAG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4L71_049 not in the Motif Atlas

Geometric match to IL_4LFB_055

Geometric discrepancy: 0.1284

The information below is about IL_4LFB_055

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_85536.2

Basepair signature

cWW-tSH-L-R-tHS-cWW-cWW

Number of instances in this motif group

8

Unit IDs

4L71|1|QA|C|1303
4L71|1|QA|G|1304
4L71|1|QA|G|1305
4L71|1|QA|A|1306
4L71|1|QA|U|1307
4L71|1|QA|U|1308
*
4L71|1|QA|A|1329
4L71|1|QA|U|1330
4L71|1|QA|G|1331
4L71|1|QA|A|1332
4L71|1|QA|A|1333
4L71|1|QA|G|1334

Current chains

Chain QA

16S Ribosomal RNA

Nearby chains

Chain QM

30S ribosomal protein S13

Chain QU

30S ribosomal protein Thx