IL_4L71_182

3D structure

PDB id

4L71 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.9 Å

Loop

Sequence

CAUCAG*CGACGACG

Length

14 nucleotides

Bulged bases

4L71|1|XA|U|244, 4L71|1|XA|C|280

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4L71_182 not in the Motif Atlas

Homologous match to IL_4LFB_011

Geometric discrepancy: 0.1014

The information below is about IL_4LFB_011

Detailed Annotation

Kink-turn with non-sequential stacking

Broad Annotation

Kink-turn

Motif group

IL_46174.3

Basepair signature

cWW-cSS-tSS-tSH-L-cWW-tHW-cWW

Number of instances in this motif group

5

Unit IDs

4L71|1|XA|C|242
4L71|1|XA|A|243
4L71|1|XA|U|244
4L71|1|XA|C|245
4L71|1|XA|A|246
4L71|1|XA|G|247
*
4L71|1|XA|C|277
4L71|1|XA|G|278
4L71|1|XA|A|279
4L71|1|XA|C|280
4L71|1|XA|G|281
4L71|1|XA|A|282
4L71|1|XA|C|283
4L71|1|XA|G|284

Current chains

Chain XA

16S Ribosomal RNA

Nearby chains

Chain XL

30S ribosomal protein S12

Chain XQ

30S ribosomal protein S17