IL_4MGN_004

3D structure

PDB id

4MGN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Co-crystal structure of the G. kaustophilus glyQS T box riboswitch Stem I in complex with tRNA

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CCGAAGCGAG*UG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_05513.1

Basepair signature

cWW-L-L-L-tWH-L-L-L-cWW

Number of instances in this motif group

1

Unit IDs

4MGN|1|C|C|37
4MGN|1|C|C|38
4MGN|1|C|G|39
4MGN|1|C|A|40
4MGN|1|C|A|41
4MGN|1|C|G|42
4MGN|1|C|C|43
4MGN|1|C|G|44
4MGN|1|C|A|45
4MGN|1|C|G|46
*
4MGN|1|C|U|68
4MGN|1|C|G|69

Current chains

Chain C

glyQS T box riboswitch

Nearby chains

Chain D

tRNA-glycine