4MGN Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_4MGN_001 | 1/A/51:63 | No text annotation HL_86109.1 | ||
| HL_4MGN_002 | 1/B/13:21 | No text annotation HL_66853.7 | ||
| HL_4MGN_003 | 1/B/30:38 | tRNA anticodon loop HL_06059.5 | ||
| HL_4MGN_004 | 1/B/52:60 | T-loop with 2 stacked bulged bases HL_28252.7 | ||
| HL_4MGN_005 | 1/C/51:63 | No text annotation | geometric HL_4MGN_001 HL_86109.1 | |
| HL_4MGN_006 | 1/D/13:21 | No text annotation | geometric HL_4MGN_002 HL_66853.7 | |
| HL_4MGN_007 | 1/D/30:38 | Anticodon loop related | geometric HL_4R4V_001 HL_06059.5 | |
| HL_4MGN_008 | 1/D/52:60 | T-loop with 2 stacked bulged bases | geometric HL_4LCK_003 HL_28252.7 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_4MGN_005 | 1/A/14:23, 1/A/81:91 | No text annotation IL_93889.1 | ||
| IL_4MGN_001 | 1/A/29:33, 1/A/73:75 | C-loop IL_63596.11 | ||
| IL_4MGN_002 | 1/A/37:46, 1/A/68:69 | No text annotation IL_64048.1 | ||
| IL_4MGN_006 | 1/C/13:23, 1/C/81:92 | No text annotation | ||
| IL_4MGN_003 | 1/C/29:33, 1/C/73:75 | C-loop | geometric IL_5B2P_003 IL_63596.11 | |
| IL_4MGN_004 | 1/C/37:46, 1/C/68:69 | No text annotation | geometric IL_4MGN_002 IL_64048.1 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J4_4MGN_001 | 1/B/7:10, 1/B/24:26, 1/B/42:48, 1/B/64:65 | tRNA junction J4_70449.27 | ||
| J4_4MGN_002 | 1/D/7:10, 1/D/24:26, 1/D/42:48, 1/D/64:65 | No text annotation |
Problematic loops
No problematic loops
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