Motif IL_05513.1 Version IL_05513.1 of this group appears in releases 1.8 to 1.18
#S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | break | 11 | 12 | 1-12 | 5-9 | 10-11 | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | IL_4MGN_004 | 4MGN | 0 | 0 | C | glyQS T box riboswitch | C | 37 | C | 38 | G | 39 | A | 40 | A | 41 | G | 42 | C | 43 | G | 44 | A | 45 | G | 46 | * | U | 68 | G | 69 | cWW | ntWH | cWW |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
CCGAAGCGAG*UG | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
CGAAGCGA* | 1 |
Release history
Release | 1.8 | 1.9 | 1.10 | 1.11 | 1.12 | 1.13 | 1.14 | 1.15 | 1.17 | 1.18 |
---|---|---|---|---|---|---|---|---|---|---|
Date | 2013-11-05 | 2013-12-07 | 2014-01-04 | 2014-02-01 | 2014-03-01 | 2014-03-29 | 2014-04-27 | 2014-06-20 | 2014-09-04 | 2014-10-07 |
Status | New id, no parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Basepair signature
- cWW-L-L-L-tWH-L-L-L-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: