IL_4P6F_030
3D structure
- PDB id
- 4P6F (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the peptolide 12C bound to bacterial ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.6 Å
Loop
- Sequence
- GGAAUU*AGGAAC
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4P6F_030 not in the Motif Atlas
- Homologous match to IL_5J7L_034
- Geometric discrepancy: 0.0761
- The information below is about IL_5J7L_034
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_04668.2
- Basepair signature
- cWW-cWW-cWW-L-R-L-R-cWW
- Number of instances in this motif group
- 8
Unit IDs
4P6F|1|QA|G|673
4P6F|1|QA|G|674
4P6F|1|QA|A|675
4P6F|1|QA|A|676
4P6F|1|QA|U|677
4P6F|1|QA|U|678
*
4P6F|1|QA|A|712
4P6F|1|QA|G|713
4P6F|1|QA|G|714
4P6F|1|QA|A|715
4P6F|1|QA|A|716
4P6F|1|QA|C|717
Current chains
- Chain QA
- 16S ribosomal RNA
Nearby chains
- Chain QF
- 30S ribosomal protein S6
- Chain QK
- 30S ribosomal protein S11
- Chain QR
- 30S ribosomal protein S18
- Chain RD
- 50S ribosomal protein L2
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