IL_4P6F_203
3D structure
- PDB id
- 4P6F (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the peptolide 12C bound to bacterial ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.6 Å
Loop
- Sequence
- GAGAG*UGGU
- Length
- 9 nucleotides
- Bulged bases
- 4P6F|1|XA|A|665
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4P6F_203 not in the Motif Atlas
- Homologous match to IL_4LFB_029
- Geometric discrepancy: 0.0825
- The information below is about IL_4LFB_029
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_15225.1
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 33
Unit IDs
4P6F|1|XA|G|662
4P6F|1|XA|A|663
4P6F|1|XA|G|664
4P6F|1|XA|A|665
4P6F|1|XA|G|666
*
4P6F|1|XA|U|740
4P6F|1|XA|G|741
4P6F|1|XA|G|742
4P6F|1|XA|U|743
Current chains
- Chain XA
- 16S ribosomal RNA
Nearby chains
- Chain XF
- 30S ribosomal protein S6
- Chain XO
- 30S ribosomal protein S15
- Chain XR
- 30S ribosomal protein S18
Coloring options: