IL_4P70_212

3D structure

PDB id

4P70 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.68 Å

Loop

Sequence

CCAGC*GG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4P70_212 not in the Motif Atlas

Geometric match to IL_4LFB_049

Geometric discrepancy: 0.3052

The information below is about IL_4LFB_049

Detailed Annotation

Minor groove platform

Broad Annotation

No text annotation

Motif group

IL_87975.1

Basepair signature

cWW-L-cWW-L

Number of instances in this motif group

10

Unit IDs

4P70|1|XA|C|1128
4P70|1|XA|C|1129
4P70|1|XA|A|1130
4P70|1|XA|G|1131
4P70|1|XA|C|1132
*
4P70|1|XA|G|1142
4P70|1|XA|G|1143

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XI

30S ribosomal protein S9