IL_4P70_371

3D structure

PDB id

4P70 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.68 Å

Loop

Sequence

CGCAAU*AGCG

Length

10 nucleotides

Bulged bases

4P70|1|YA|G|1332

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4P70_371 not in the Motif Atlas

Geometric match to IL_5TBW_062

Geometric discrepancy: 0.2345

The information below is about IL_5TBW_062

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_51005.1

Basepair signature

cWW-L-R-tWH-cWW-L-L

Number of instances in this motif group

2

Unit IDs

4P70|1|YA|C|1318
4P70|1|YA|G|1319
4P70|1|YA|C|1320
4P70|1|YA|A|1321
4P70|1|YA|A|1322
4P70|1|YA|U|1323
*
4P70|1|YA|A|1331
4P70|1|YA|G|1332
4P70|1|YA|C|1333
4P70|1|YA|G|1334

Current chains

Chain YA

23S rRNA

Nearby chains

Chain YW

50S ribosomal protein L22

Chain YX

50S ribosomal protein L23