Motif IL_51005.1 Version IL_51005.1 of this group appears in releases 3.89 to 3.89
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | break | 7 | 8 | 9 | 1-9 | 2-8 | 3-7 | 5-8 | 6-7 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_3AGV_004 | 3AGV | 0.0000 | 0 | S | RNA (24-mer) | G | 4 | G | 5 | UFT | 6 | G | 7 | CFZ | 8 | UFT | 9 | * | A | 18 | A | 19 | CFZ | 20 | cWW | tSH | tWH | cWW | |
| 2 | IL_5TBW_062 | 5TBW | 0.4398 | 1 | 1 | LSU rRNA | G | 1500 | U | 1501 | C | 1502 | A | 1503 | A | 1504 | C | 1505 | * | G | 1513 | A | 1515 | C | 1516 | cWW | tWH | cWS | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GG(UFT)G(CFZ)(UFT)*AA(CFZ) | 1 |
| GUCAAC*GGAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| G(UFT)G(CFZ)*A | 1 |
| UCAA*GA | 1 |
Release history
| Release | 3.89 |
|---|---|
| Date | 2024-10-09 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-L-R-tWH-cWW-L-L
- Heat map statistics
- Min 0.44 | Avg 0.22 | Max 0.44
Coloring options: