IL_4QCN_001
3D structure
- PDB id
- 4QCN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA- substrates in the A and P sites. This entry contains the 50S subunit of the first 70S ribosome in the ASU.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.6 Å
Loop
- Sequence
- GUGGAUG*CUGAAAC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_86933.2
- Basepair signature
- cWW-cWW-tSH-tHS-tHS-L-R-cWW
- Number of instances in this motif group
- 9
Unit IDs
4QCN|1|A|G|24
4QCN|1|A|U|25
4QCN|1|A|G|26
4QCN|1|A|G|27
4QCN|1|A|A|28
4QCN|1|A|U|29
4QCN|1|A|G|30
*
4QCN|1|A|C|535
4QCN|1|A|U|536
4QCN|1|A|G|537
4QCN|1|A|A|538
4QCN|1|A|A|539
4QCN|1|A|A|540
4QCN|1|A|C|541
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain 5
- 50S ribosomal protein L32
- Chain U
- 50S ribosomal protein L20
- Chain W
- 50S ribosomal protein L22
Coloring options: