IL_4QCN_038
3D structure
- PDB id
- 4QCN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA- substrates in the A and P sites. This entry contains the 50S subunit of the first 70S ribosome in the ASU.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.6 Å
Loop
- Sequence
- CUAAGUG*CUUAAG
- Length
- 13 nucleotides
- Bulged bases
- 4QCN|1|A|U|1187, 4QCN|1|A|A|1189
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_04397.2
- Basepair signature
- cWW-tWH-L-tHW-cSH-cWW
- Number of instances in this motif group
- 5
Unit IDs
4QCN|1|A|C|1064
4QCN|1|A|U|1065
4QCN|1|A|A|1066
4QCN|1|A|A|1067
4QCN|1|A|G|1068
4QCN|1|A|U|1069
4QCN|1|A|G|1070
*
4QCN|1|A|C|1185
4QCN|1|A|U|1186
4QCN|1|A|U|1187
4QCN|1|A|A|1188
4QCN|1|A|A|1189
4QCN|1|A|G|1190
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain 9
- 50S ribosomal protein L36
- Chain N
- 50S ribosomal protein L13
Coloring options: