IL_4QCN_073
3D structure
- PDB id
- 4QCN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA- substrates in the A and P sites. This entry contains the 50S subunit of the first 70S ribosome in the ASU.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.6 Å
Loop
- Sequence
- CGAAAUUCCUUG*CCUG
- Length
- 16 nucleotides
- Bulged bases
- 4QCN|1|A|A|1960, 4QCN|1|A|U|1966, 4QCN|1|A|U|1985
- QA status
- Modified nucleotides:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_15123.3
- Basepair signature
- cWW-L-R-cHW-L-L-L-L-L-cWW
- Number of instances in this motif group
- 6
Unit IDs
4QCN|1|A|C|1956
4QCN|1|A|G|1957
4QCN|1|A|A|1958
4QCN|1|A|A|1959
4QCN|1|A|A|1960
4QCN|1|A|U|1961
4QCN|1|A|U|1962
4QCN|1|A|C|1963
4QCN|1|A|C|1964
4QCN|1|A|U|1965
4QCN|1|A|U|1966
4QCN|1|A|G|1967
*
4QCN|1|A|C|1983
4QCN|1|A|C|1984
4QCN|1|A|U|1985
4QCN|1|A|G|1986
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain D
- 50S ribosomal protein L2
Coloring options: