IL_4QJH_002

3D structure

PDB id

4QJH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of the Twister Ribozyme with the Nucleotide 5'- to the Cleavage Site Ordered at 4.1 A Resolution

Experimental method

X-RAY DIFFRACTION

Resolution

3.88 Å

Loop

Sequence

UAU*AUA

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary: UAU,AUA

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4QJH_002 not in the Motif Atlas

Geometric match to IL_3LA5_001

Geometric discrepancy: 0.2233

The information below is about IL_3LA5_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_86319.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

269

Unit IDs

4QJH|1|A|U|20
4QJH|1|A|A|21
4QJH|1|A|U|22
*
4QJH|1|B|A|31
4QJH|1|B|U|32
4QJH|1|B|A|33

Current chains

Chain A

Twister Ribozyme

Chain B

Twister Ribozyme

Nearby chains