IL_4QK8_001
3D structure
- PDB id
- 4QK8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermoanaerobacter pseudethanolicus c-di-AMP riboswitch
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.05 Å
Loop
- Sequence
- GGAACC*GCUAAC
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_55953.1
- Basepair signature
- cWW-tSH-R-tHS-L-bif-cWW
- Number of instances in this motif group
- 5
Unit IDs
4QK8|1|A|G|26
4QK8|1|A|G|27
4QK8|1|A|A|28
4QK8|1|A|A|29
4QK8|1|A|C|30
4QK8|1|A|C|31
*
4QK8|1|A|G|94
4QK8|1|A|C|95
4QK8|1|A|U|96
4QK8|1|A|A|97
4QK8|1|A|A|98
4QK8|1|A|C|99
Current chains
- Chain A
- C-di-AMP riboswitch
Nearby chains
No other chains within 10ÅColoring options: