IL_4R4P_004

3D structure

PDB id

4R4P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of the VS ribozyme-A756G mutant

Experimental method

X-RAY DIFFRACTION

Resolution

3.07 Å

Loop

Sequence

CAC*GUAG

Length

7 nucleotides

Bulged bases

4R4P|1|A|A|713

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4R4P_004 not in the Motif Atlas

Geometric match to IL_5J7L_286

Geometric discrepancy: 0.248

The information below is about IL_5J7L_286

Detailed Annotation

Isolated cWS basepair

Broad Annotation

No text annotation

Motif group

IL_42997.3

Basepair signature

cWW-L-R-cWW

Number of instances in this motif group

20

Unit IDs

4R4P|1|A|C|660
4R4P|1|A|A|661
4R4P|1|A|C|662
*
4R4P|1|A|G|711
4R4P|1|A|U|712
4R4P|1|A|A|713
4R4P|1|A|G|714

Current chains

Chain A

VS ribozyme RNA

Nearby chains