IL_4R4P_009

3D structure

PDB id

4R4P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of the VS ribozyme-A756G mutant

Experimental method

X-RAY DIFFRACTION

Resolution

3.07 Å

Loop

Sequence

CAG*CG

Length

5 nucleotides

Bulged bases

4R4P|1|A|A|652||||8_555

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4R4P_009 not in the Motif Atlas

Geometric match to IL_4R4V_003

Geometric discrepancy: 0.1649

The information below is about IL_4R4V_003

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_14190.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

160

Unit IDs

4R4P|1|A|C|651||||8_555
4R4P|1|A|A|652||||8_555
4R4P|1|A|G|653||||8_555
*
4R4P|1|A|C|766||||8_555
4R4P|1|A|G|767||||8_555

Current chains

Chain A

VS ribozyme RNA

Nearby chains