IL_4TUB_069

3D structure

PDB id

4TUB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA-Thr bound to Codon ACC-C on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

CGAAU*AUAG

Length

9 nucleotides

Bulged bases

4TUB|1|RA|A|307

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4TUB_069 not in the Motif Atlas

Homologous match to IL_7RQB_011

Geometric discrepancy: 0.1496

The information below is about IL_7RQB_011

Detailed Annotation

tSH-tHW

Broad Annotation

No text annotation

Motif group

IL_04059.1

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

13

Unit IDs

4TUB|1|RA|C|304
4TUB|1|RA|G|305
4TUB|1|RA|A|306
4TUB|1|RA|A|307
4TUB|1|RA|U|308
*
4TUB|1|RA|A|381
4TUB|1|RA|U|382
4TUB|1|RA|A|383
4TUB|1|RA|G|384

Current chains

Chain RA

23S rRNA

Nearby chains