IL_4TUB_107

3D structure

PDB id

4TUB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA-Thr bound to Codon ACC-C on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

CUAAG*CGAAG

Length

10 nucleotides

Bulged bases

4TUB|1|RA|A|1425

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4TUB_107 not in the Motif Atlas

Homologous match to IL_7RQB_052

Geometric discrepancy: 0.0618

The information below is about IL_7RQB_052

Detailed Annotation

UAA/GAN

Broad Annotation

No text annotation

Motif group

IL_89002.2

Basepair signature

cWW-tWH-L-tHS-cWW

Number of instances in this motif group

20

Unit IDs

4TUB|1|RA|C|1397
4TUB|1|RA|U|1398
4TUB|1|RA|A|1399
4TUB|1|RA|A|1400
4TUB|1|RA|G|1401
*
4TUB|1|RA|C|1422
4TUB|1|RA|G|1423
4TUB|1|RA|A|1424
4TUB|1|RA|A|1425
4TUB|1|RA|G|1426

Current chains

Chain RA

23S rRNA

Nearby chains

Chain R7

50S ribosomal protein L34

Chain RD

50S ribosomal protein L2