IL_4TUB_116

3D structure

PDB id

4TUB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA-Thr bound to Codon ACC-C on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

UG*CAACAAG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4TUB_116 not in the Motif Atlas

Homologous match to IL_7RQB_061

Geometric discrepancy: 0.5463

The information below is about IL_7RQB_061

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_52493.1

Basepair signature

cWW-L-cWW-L-L

Number of instances in this motif group

2

Unit IDs

4TUB|1|RA|U|1528
4TUB|1|RA|G|1529
*
4TUB|1|RA|C|1552
4TUB|1|RA|A|1553
4TUB|1|RA|A|1554
4TUB|1|RA|C|1555
4TUB|1|RA|A|1556
4TUB|1|RA|A|1557
4TUB|1|RA|G|1558

Current chains

Chain RA

23S rRNA

Nearby chains