IL_4TUB_118

3D structure

PDB id

4TUB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA-Thr bound to Codon ACC-C on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

GGAAG*UGACAAC

Length

12 nucleotides

Bulged bases

4TUB|1|RA|C|1590

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4TUB_118 not in the Motif Atlas

Homologous match to IL_7RQB_063

Geometric discrepancy: 0.2504

The information below is about IL_7RQB_063

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_02656.1

Basepair signature

cWW-L-R-L-R-L-R-L-cWW

Number of instances in this motif group

2

Unit IDs

4TUB|1|RA|G|1572
4TUB|1|RA|G|1573
4TUB|1|RA|A|1574
4TUB|1|RA|A|1575
4TUB|1|RA|G|1576
*
4TUB|1|RA|U|1587
4TUB|1|RA|G|1588
4TUB|1|RA|A|1589
4TUB|1|RA|C|1590
4TUB|1|RA|A|1591
4TUB|1|RA|A|1592
4TUB|1|RA|C|1593

Current chains

Chain RA

23S rRNA

Nearby chains